PPDB

The Plant Proteome Database

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AT1G17420.1   lipoxygenase 3

Lab Annot. lipoxygenase 3 (detected in abc1k1xabc1k3)
Mapman: 17.7.1.2 hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase
Curated Location plastoglobules (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G72520.1 11Arabidopsis thaliana0927839023 (22)C
AT1G67560.1 11Arabidopsis thaliana084152698 (6)C
AT3G45140.1 11Arabidopsis thaliana086944631832 (1541)C
Os03g08220.1 7Oryza sativa088067790 (0)M
Os04g37430.1 7Oryza sativa057664783 (3)C
Os02g10120.1 7Oryza sativa0840466526 (26)C
Zm00001eb005920_P001 agpv5Zea mays087665790 (0)M
GRMZM2G017616_P01 3.21Zea mays087665794 (4)M
v1_GRMZM2G017616_P01 4a53Zea mays087665794 (4)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Lipoxygenase(1) PLAT(1)
TargetP: Chloroplast (Class 3 C0.734; M0.133; S0.022; _0.136)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 919 aa (-cTP 867)
Molecular Weight 103.73 kDA(-cTP 97.86)
PI 7.69(-cTP 6.53)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
655Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
668Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (rep. 3-1)
685Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3 (rep. 1-2)
694Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (rep. 3-2)
872Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (1-8); k2k3 (9-10)
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1127Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Leaf)
21693672(wound-regulated leaf proteome (wt))

Comparative Proteomics Data


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