PPDB

The Plant Proteome Database

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AT1G09800.1   Pseudouridine synthase family protein

Lab Annot. Pseudouridine synthase protein
Mapman: 29.1.30 protein.aa activation.pseudouridylate synthase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G09800.2 11Arabidopsis thaliana03721001000 (0)_
AT3G06950.1 11Arabidopsis thaliana1E-1534526410 (0)C
Os12g09290.1 7Oryza sativa5E-16035063760 (0)C
Os05g19954.1 7Oryza sativa6E-1532524380 (0)M
Os05g19954.4 7Oryza sativa1E-0822524390 (0)_
Zm00001eb138750_P002 agpv5Zea mays7E-15032664780 (0)_
Zm00001eb138750_P005 agpv5Zea mays7E-15032664780 (0)_
Zm00001eb138750_P003 agpv5Zea mays3E-14732663780 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PseudoU_synth_1(2)
TargetP: Cytoplasm (Class 2 C0.205; M0.044; S0.066; _0.922)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 372 aa (-cTP 360)
Molecular Weight 41.54 kDA(-cTP )
PI 7.15(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help