PPDB

The Plant Proteome Database

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AT1G08140.1   cation/H+ exchanger 6A

Lab Annot.
Mapman: 34.12 transport.metal
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G28170.1 11Arabidopsis thaliana080447670 (0)_
AT1G08150.1 11Arabidopsis thaliana079544650 (0)_
AT1G08135.1 11Arabidopsis thaliana079145640 (0)_
Os05g40650.1 7Oryza sativa8E-9981729500 (0)_
Os01g60140.1 7Oryza sativa2E-9282528490 (0)_
Os11g01820.1 7Oryza sativa5E-8675029480 (0)_
GRMZM2G037343_P01 3.21Zea mays1E-9983130492 (2)_
Zm00001eb291010_P001 agpv5Zea mays1E-9983130490 (0)_
v1_GRMZM2G037343_P01 4a53Zea mays1E-9983130492 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Na_H_Exchanger(1)
TargetP: Cytoplasm (Class 1 C0.045; M0.052; S0.120; _0.954)
Predotar:
Subcel. Location:
TM-HMM prediction: 10 TMs
Aramemnon: 10 TMs
TAT position:
Length 818 aa (-cTP 770)
Molecular Weight 93.39 kDA(-cTP )
PI 7.27(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help