PPDB

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AT1G04190.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Tetratricopeptide repeat (TPR) protein
Mapman: 26.33* misc. tetratricopeptide repeat (TPR)

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G62740.1 11 Arabidopsis thaliana 6E-19 110 40 62 82 (23) _
AT1G12270.1 11 Arabidopsis thaliana 5E-18 110 38 64 89 (46) _
AT4G12400.1 11 Arabidopsis thaliana 6E-18 96 40 65 6 (4) _
Os12g41190.1 7 Oryza sativa 2E-169 306 70 86 8 (8) _
Os03g47620.1 7 Oryza sativa 6E-21 108 42 62 0 (0) _
Os04g45480.1 7 Oryza sativa 3E-18 110 37 63 0 (0) _
GRMZM2G115615_P01 3.21 Zea mays 3E-174 310 72 87 17 (17) _
v1_GRMZM2G115615_P01 4a53 Zea mays 3E-174 310 72 87 16 (16) _
Zm00001eb031280_P001 agpv5 Zea mays 3E-174 310 72 87 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(2) MIT(2) PPTA(2) TPR_1(3) TPR_11(2) TPR_12(2) TPR_14(2) TPR_16(2) TPR_17
TargetP:	Cytoplasm (Class 1 C0.133; M0.035; S0.027; _0.966)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	328 aa (-cTP 259)
Molecular Weight	37.18 kDA(-cTP )
PI	8.92(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
20706207(contaminants cell cycle interactome (cell culture))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data