PPDB

The Plant Proteome Database

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AT1G03550.1   Secretory carrier membrane protein (SCAMP) family protein

Lab Annot.
Mapman: 34.99 transport.misc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G03550.4 11Arabidopsis thaliana02551001000 (0)_
AT1G03550.5 11Arabidopsis thaliana2E-174234991000 (0)_
AT1G03550.3 11Arabidopsis thaliana6E-1652241001000 (0)_
Os07g37740.1 7Oryza sativa6E-14230463750 (0)_
Os01g57220.1 7Oryza sativa2E-13328566800 (0)_
Os05g42330.1 7Oryza sativa5E-126282647817 (17)_
GRMZM2G041181_P01 3.21Zea mays3E-14730365761 (1)_
Zm00001eb324430_P001 agpv5Zea mays3E-14730365760 (0)_
v1_GRMZM2G041181_P01 4a53Zea mays3E-14730365761 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF872(1) RNase_Y_N(1) SCAMP(1)
TargetP: Cytoplasm (Class 4 C0.478; M0.064; S0.084; _0.708)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 283 aa (-cTP 266)
Molecular Weight 31.87 kDA(-cTP )
PI 6.60(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help