PPDB

The Plant Proteome Database

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AT1G02090.1   Proteasome component (PCI) domain protein

Lab Annot. FUS5 (FUSCA 5); MAP kinase kinase
Mapman: 30.11.1 signalling.light.COP9 signalosome
Curated Location
TAIR curated location: signalosome complex11019806
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G02090.2 11Arabidopsis thaliana1E-16522310010020 (15)_
AT1G02090.3 11Arabidopsis thaliana4E-16522310010020 (15)_
Os07g30840.2 7Oryza sativa9E-119261657925 (25)_
Os07g30840.1 7Oryza sativa2E-118261647925 (25)_
Os07g30840.4 7Oryza sativa3E-101224668025 (25)_
Zm00001eb321750_P004 agpv5Zea mays1E-11926064780 (0)S
GRMZM2G085670_P05 3.21Zea mays1E-11926064788 (8)S
v1_GRMZM2G085670_P05 4a53Zea mays1E-11926064783 (3)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CSN7a_helixI(2) PCI(1)
TargetP: Cytoplasm (Class 2 C0.094; M0.063; S0.128; _0.881)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 260 aa (-cTP 243)
Molecular Weight 29.47 kDA(-cTP )
PI 5.50(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2043Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2047Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2048Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2284Detail        [A. thaliana] Clp C1 WT
2285Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
22060019(phosphoproteome - N-starved seedlings)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


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