PPDB

The Plant Proteome Database

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AT1G01680.1   plant U-box 54

Lab Annot. plant U-box 54
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G01670.2 11Arabidopsis thaliana5E-4112260710 (0)_
AT1G01670.1 11Arabidopsis thaliana5E-4112260710 (0)_
AT1G01660.1 11Arabidopsis thaliana3E-4017844620 (0)_
Os02g57700.1 7Oryza sativa1E-2016836530 (0)_
Os06g06450.1 7Oryza sativa4E-199451620 (0)_
Os09g39640.1 7Oryza sativa5E-196955710 (0)_
Zm00001eb375820_P003 agpv5Zea mays1E-207656680 (0)_
Zm00001eb375820_P001 agpv5Zea mays2E-207656680 (0)_
Zm00001eb375820_P002 agpv5Zea mays2E-207656680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: U-box(1) Usp(1) zf-NOSIP(1)
TargetP: Cytoplasm (Class 2 C0.098; M0.235; S0.047; _0.853)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 308 aa (-cTP 262)
Molecular Weight 35.39 kDA(-cTP )
PI 6.39(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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